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Mutant Information

Variant Information

Single base substitutions: 30

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	20603479	C-T	HET
SBS	Chr1	33691579	A-G	Homo
SBS	Chr1	41219356	A-T	Homo
SBS	Chr10	12382341	C-T	HET	NON_SYNONYMOUS_CODING	LOC_Os10g24170
SBS	Chr10	12382343	C-T	HET	NON_SYNONYMOUS_CODING	LOC_Os10g24170
SBS	Chr11	13483178	T-C	Homo	NON_SYNONYMOUS_CODING	LOC_Os11g23820
SBS	Chr11	14100823	T-C	Homo
SBS	Chr12	12173098	A-G	Homo
SBS	Chr12	23020175	T-C	HET
SBS	Chr12	26474494	G-A	HET
SBS	Chr2	21745621	A-T	Homo
SBS	Chr2	27517627	G-C	HET
SBS	Chr2	29081136	G-C	HET
SBS	Chr3	14005514	T-C	Homo
SBS	Chr3	18902132	G-A	Homo	NON_SYNONYMOUS_CODING	LOC_Os03g33044
SBS	Chr3	7389994	G-T	HET
SBS	Chr3	757062	G-T	HET
SBS	Chr4	15781417	C-T	Homo
SBS	Chr4	20977918	C-T	HET
SBS	Chr4	8657833	A-G	Homo	NON_SYNONYMOUS_CODING	LOC_Os04g15944
SBS	Chr5	16868216	T-A	HET
SBS	Chr6	12909769	C-T	HET
SBS	Chr6	23618203	C-T	HET
SBS	Chr6	26820408	T-A	HET
SBS	Chr6	29512619	A-T	HET	NON_SYNONYMOUS_CODING	LOC_Os06g48760
SBS	Chr7	11524319	G-A	HET
SBS	Chr7	15484761	T-G	HET
SBS	Chr8	18279271	T-A	HET
SBS	Chr8	6481005	G-T	Homo
SBS	Chr9	16157564	T-C	HET

Deletions: 13

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr5	2699492	2699497	5
Deletion	Chr2	3529092	3529093	1
Deletion	Chr1	5467001	5507000	39999	6
Deletion	Chr3	6390829	6390833	4
Deletion	Chr1	8486024	8486025	1
Deletion	Chr10	9752536	9752537	1
Deletion	Chr6	11670019	11670023	4
Deletion	Chr4	14007052	14007054	2
Deletion	Chr9	14660804	14660805	1
Deletion	Chr8	17595770	17595771	1	LOC_Os08g28760
Deletion	Chr2	20697209	20697211	2
Deletion	Chr8	21261835	21261848	13
Deletion	Chr4	22354666	22354678	12	LOC_Os04g37570

Insertions: 2

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr6	23590120	23590120	1	LOC_Os06g39740
Insertion	Chr9	11164488	11164491	4

Inversions: 7

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr5	17251478	17252344
Inversion	Chr5	17251482	17252350
Inversion	Chr4	25972468	26015940	2
Inversion	Chr4	25972497	26015943	2
Inversion	Chr3	26046724	26047008
Inversion	Chr6	26489014	27055570
Inversion	Chr6	26489698	27055575	LOC_Os06g43970

Translocations: 10

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr11	5263697	Chr7	10477200
Translocation	Chr11	8196297	Chr4	13912048
Translocation	Chr9	9765905	Chr2	6850978
Translocation	Chr6	13507643	Chr1	24726876
Translocation	Chr3	19476913	Chr2	35887263	LOC_Os03g34200
Translocation	Chr3	19477835	Chr2	35887279
Translocation	Chr12	22800132	Chr8	17299284	2
Translocation	Chr6	26489688	Chr2	3752325	2
Translocation	Chr12	27049564	Chr6	6604742	LOC_Os12g43580
Translocation	Chr6	27760217	Chr5	17609511	2

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