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Mutant Information

Variant Information

Single base substitutions: 32

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	25217160	T-C	HET
SBS	Chr1	29699213	T-C	HET
SBS	Chr1	30420624	A-G	HET
SBS	Chr1	38346787	T-C	HET	NON_SYNONYMOUS_CODING	LOC_Os01g66080
SBS	Chr1	40165816	A-T	HET
SBS	Chr10	7680633	G-A	Homo
SBS	Chr11	11833504	C-G	HET
SBS	Chr11	3688821	G-A	HET
SBS	Chr12	22258313	C-T	HET
SBS	Chr12	9082995	G-T	HET
SBS	Chr2	14896674	A-G	HET
SBS	Chr2	17787770	G-A	HET
SBS	Chr2	4285531	C-T	HET
SBS	Chr3	29243553	C-T	HET
SBS	Chr3	30508149	C-T	HET
SBS	Chr3	35987676	C-G	HET
SBS	Chr4	13545714	C-T	HET
SBS	Chr4	15927341	C-T	Homo
SBS	Chr4	17427874	T-C	Homo
SBS	Chr4	26632064	T-A	HET
SBS	Chr4	29361302	C-A	Homo
SBS	Chr5	26449405	G-T	HET
SBS	Chr6	15897461	G-T	Homo
SBS	Chr6	16205899	G-A	HET
SBS	Chr6	29109989	G-A	Homo
SBS	Chr6	7459790	G-A	HET
SBS	Chr7	15610886	G-C	HET
SBS	Chr7	16820386	C-A	HET	NON_SYNONYMOUS_CODING	LOC_Os07g28740
SBS	Chr7	22760714	A-G	HET
SBS	Chr8	15492740	A-G	HET
SBS	Chr8	23323367	G-A	Homo
SBS	Chr9	3636624	C-A	HET

Deletions: 10

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr9	7757931	7757933	2
Deletion	Chr3	8618704	8618705	1	LOC_Os03g15620
Deletion	Chr4	10133194	10133195	1
Deletion	Chr2	12475001	12578000	102999	15
Deletion	Chr4	12909940	12910460	520
Deletion	Chr3	15893650	15893651	1	LOC_Os03g27730
Deletion	Chr12	17677841	17677842	1	LOC_Os12g29640
Deletion	Chr12	21411278	21411279	1	LOC_Os12g35220
Deletion	Chr7	25845685	25845692	7
Deletion	Chr1	26022612	26022615	3	LOC_Os01g45810

Insertions: 5

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr1	16256193	16256193	1
Insertion	Chr1	16272714	16272714	1
Insertion	Chr1	3961991	3961993	3
Insertion	Chr6	17523889	17523892	4	LOC_Os06g30340
Insertion	Chr8	16899200	16899205	6

Inversions: 5

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr2	3050950	3295705	LOC_Os02g06120
Inversion	Chr2	3050956	3295727	LOC_Os02g06120
Inversion	Chr4	15119435	15291748
Inversion	Chr10	18381304	18815296	2
Inversion	Chr10	18381309	18815311	2

Translocations: 12

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr9	2710751	Chr3	13456890	2
Translocation	Chr9	2891149	Chr5	3288566	LOC_Os09g06160
Translocation	Chr9	7075763	Chr2	12582948	2
Translocation	Chr9	7079514	Chr2	12584194	2
Translocation	Chr5	7917874	Chr3	8412207	2
Translocation	Chr12	10087162	Chr8	21909928
Translocation	Chr5	14575787	Chr2	8032374
Translocation	Chr8	16304338	Chr1	10794248
Translocation	Chr9	17957718	Chr3	963103
Translocation	Chr12	18698802	Chr5	6216308
Translocation	Chr9	22820617	Chr8	10066194
Translocation	Chr11	27438284	Chr7	25323789

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