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Mutant Information

Variant Information

Single base substitutions: 30

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	952067	T-C	HET	NON_SYNONYMOUS_CODING	LOC_Os01g02740
SBS	Chr1	10399939	G-A	HET
SBS	Chr1	10399941	T-A	HET
SBS	Chr1	11751469	C-T	HET
SBS	Chr1	37498066	C-T	Homo	NON_SYNONYMOUS_CODING	LOC_Os01g64610
SBS	Chr2	14606479	G-A	Homo
SBS	Chr2	15148528	A-G	HET
SBS	Chr2	15262017	C-T	HET
SBS	Chr2	21927307	C-T	Homo
SBS	Chr3	11884541	T-C	HET	NON_SYNONYMOUS_CODING	LOC_Os03g20949
SBS	Chr4	30697667	T-A	HET
SBS	Chr4	30851457	G-A	Homo
SBS	Chr4	31894861	A-G	Homo
SBS	Chr5	18525806	C-T	Homo
SBS	Chr5	22032778	C-T	HET
SBS	Chr7	8810635	C-T	HET	NON_SYNONYMOUS_CODING	LOC_Os07g15270
SBS	Chr7	9453152	T-C	HET
SBS	Chr8	13074400	G-A	HET
SBS	Chr8	18643401	C-T	Homo
SBS	Chr9	267776	A-G	HET
SBS	Chr9	14139870	G-A	HET
SBS	Chr10	8135256	C-G	HET
SBS	Chr10	16927488	C-T	Homo
SBS	Chr11	6946776	T-C	HET
SBS	Chr11	8087822	G-A	Homo
SBS	Chr11	22018756	A-G	HET
SBS	Chr12	9518113	C-A	HET
SBS	Chr12	10071189	G-T	HET
SBS	Chr12	13624840	A-G	HET
SBS	Chr12	25745264	T-A	HET

Deletions: 19

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr5	49552	49554	2
Deletion	Chr5	2405200	2405201	1
Deletion	Chr9	2505683	2505687	4
Deletion	Chr12	7125001	7167000	41999	5
Deletion	Chr4	7691310	7691322	12
Deletion	Chr8	8040105	8040112	7	LOC_Os08g13520
Deletion	Chr8	8364104	8364107	3
Deletion	Chr4	8587746	8587747	1
Deletion	Chr8	9744489	9744490	1
Deletion	Chr5	10382097	10382106	9	LOC_Os05g18050
Deletion	Chr10	10409517	10409519	2
Deletion	Chr5	10686298	10686299	1
Deletion	Chr10	12255500	12255501	1
Deletion	Chr10	12523001	12577000	53999	8
Deletion	Chr5	16439555	16439572	17
Deletion	Chr5	19909272	19909277	5
Deletion	Chr3	32050378	32050382	4
Deletion	Chr4	33453799	33453808	9
Deletion	Chr3	36360952	36360953	1	LOC_Os03g64330

Insertions: 7

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr1	8857518	8857519	2
Insertion	Chr3	20637990	20637990	1
Insertion	Chr6	5487850	5487857	8
Insertion	Chr6	16046926	16046935	10
Insertion	Chr7	27604320	27604322	3	LOC_Os07g46260
Insertion	Chr9	5298719	5298719	1
Insertion	Chr11	368917	368917	1

Inversions: 9

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr11	1462848	2004606	2
Inversion	Chr11	1462856	2004606	2
Inversion	Chr4	3036752	3212947	2
Inversion	Chr10	11785734	12770111
Inversion	Chr10	12738163	12770110	LOC_Os10g24770
Inversion	Chr8	18716274	18717375
Inversion	Chr7	24384730	24563737	2
Inversion	Chr4	27980408	28100629
Inversion	Chr4	27980419	28100635

Translocations: 9

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr11	11508165	Chr8	19974189	2
Translocation	Chr11	13709698	Chr1	5361945	2
Translocation	Chr8	14202095	Chr3	18188387
Translocation	Chr12	16808031	Chr9	4916671
Translocation	Chr5	17078725	Chr4	12974764	2
Translocation	Chr8	18077820	Chr5	17234027	LOC_Os08g29490
Translocation	Chr12	18415929	Chr11	11242628	LOC_Os12g30650
Translocation	Chr8	18741391	Chr5	10771550	2
Translocation	Chr11	19390588	Chr2	23245301	LOC_Os11g32820

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