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Mutant Information

Variant Information

Single base substitutions: 33

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	16779637	T-G	HET
SBS	Chr1	22316922	G-A	Homo	NON_SYNONYMOUS_CODING	LOC_Os01g39570
SBS	Chr1	23558315	G-A	Homo
SBS	Chr1	34137040	G-A	HET
SBS	Chr2	5707707	C-A	HET
SBS	Chr2	19898560	G-C	HET	NON_SYNONYMOUS_CODING	LOC_Os02g33460
SBS	Chr2	32764606	C-T	HET	NON_SYNONYMOUS_CODING	LOC_Os02g53550
SBS	Chr3	1337746	T-C	Homo
SBS	Chr3	17930861	C-G	HET
SBS	Chr3	22598007	G-A	HET
SBS	Chr4	1517938	T-G	Homo
SBS	Chr4	2909712	T-A	HET
SBS	Chr5	3013116	G-A	HET
SBS	Chr5	6247291	G-A	Homo
SBS	Chr6	15023416	T-C	HET
SBS	Chr6	16196322	A-T	Homo
SBS	Chr6	28201353	G-A	HET
SBS	Chr6	30719088	G-A	HET
SBS	Chr7	10628031	C-T	HET
SBS	Chr7	14056065	G-A	HET	NON_SYNONYMOUS_CODING	LOC_Os07g24700
SBS	Chr8	8565592	T-C	HET
SBS	Chr8	13858770	G-C	Homo
SBS	Chr8	26018087	C-A	HET
SBS	Chr9	627181	C-A	HET
SBS	Chr9	5495450	G-T	Homo	NON_SYNONYMOUS_CODING	LOC_Os09g10080
SBS	Chr9	15598767	A-C	Homo
SBS	Chr10	1983481	G-A	Homo
SBS	Chr10	1983482	G-A	Homo
SBS	Chr10	14834614	A-T	Homo
SBS	Chr11	16914543	A-T	HET
SBS	Chr11	23768054	C-A	Homo	NON_SYNONYMOUS_CODING	LOC_Os11g39870
SBS	Chr12	13311053	C-A	Homo
SBS	Chr12	26602699	A-G	Homo

Deletions: 25

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr9	808868	808875	7
Deletion	Chr2	2094370	2094379	9
Deletion	Chr10	3165318	3165324	6
Deletion	Chr7	8341627	8341630	3
Deletion	Chr5	8360229	8360230	1
Deletion	Chr11	9899458	9899467	9
Deletion	Chr4	10598448	10598449	1	LOC_Os04g19090
Deletion	Chr11	10733186	10733198	12
Deletion	Chr8	13284192	13284225	33
Deletion	Chr5	14230001	14273000	42999	5
Deletion	Chr6	14410453	14410460	7
Deletion	Chr3	16778135	16778136	1
Deletion	Chr11	16901455	16901472	17
Deletion	Chr4	20756980	20756981	1
Deletion	Chr2	21711001	21822000	110999	11
Deletion	Chr2	22265274	22265275	1
Deletion	Chr12	24102850	24102853	3
Deletion	Chr6	25094878	25094880	2
Deletion	Chr6	25408824	25408841	17	LOC_Os06g42300
Deletion	Chr1	27337341	27337342	1
Deletion	Chr4	27732703	27732704	1
Deletion	Chr1	30207102	30207108	6
Deletion	Chr4	31766027	31766032	5
Deletion	Chr1	33095962	33095963	1	LOC_Os01g57270
Deletion	Chr4	35074674	35074677	3

Insertions: 3

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr1	43134340	43134342	3
Insertion	Chr7	1406972	1406972	1	LOC_Os07g03520
Insertion	Chr10	13779123	13779124	2

Inversions: 3

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr4	10949381	10954084
Inversion	Chr4	10949384	10954091
Inversion	Chr4	21361189	21361366	LOC_Os04g35140

Translocations: 5

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr2	31	Chr1	1116
Translocation	Chr10	2607712	Chr6	15332761	LOC_Os10g05270
Translocation	Chr11	8311425	Chr1	17033500	LOC_Os11g14750
Translocation	Chr8	22651595	Chr7	3872141	2
Translocation	Chr4	25083256	Chr1	18542666	LOC_Os04g42399

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