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Mutant Information

Variant Information

Single base substitutions: 33

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	12099536	C-G	HET	NON_SYNONYMOUS_CODING	LOC_Os01g21600
SBS	Chr1	26418162	G-T	HET
SBS	Chr1	27570643	G-T	HET
SBS	Chr1	29082263	G-T	HET
SBS	Chr1	37664169	G-A	HET
SBS	Chr1	38219721	C-A	HET
SBS	Chr11	15554806	G-A	HET
SBS	Chr11	23613164	T-G	HET
SBS	Chr11	9597616	A-G	HET
SBS	Chr12	21371881	C-T	HET	NON_SYNONYMOUS_CODING	LOC_Os12g35120
SBS	Chr2	13113701	C-A	HET	NON_SYNONYMOUS_CODING	LOC_Os02g22050
SBS	Chr2	23155038	G-A	Homo
SBS	Chr2	25101743	G-A	Homo	NON_SYNONYMOUS_CODING	LOC_Os02g41750
SBS	Chr2	32477789	G-A	HET
SBS	Chr3	10650376	T-A	HET
SBS	Chr3	17954274	G-T	Homo
SBS	Chr3	19751112	G-A	HET
SBS	Chr4	12137933	G-A	Homo
SBS	Chr4	26176757	G-C	HET
SBS	Chr5	17978883	T-C	HET
SBS	Chr5	23693612	G-A	Homo	NON_SYNONYMOUS_CODING	LOC_Os05g40320
SBS	Chr6	18145846	C-A	HET
SBS	Chr6	23106082	C-T	HET
SBS	Chr6	27829185	G-T	HET
SBS	Chr6	761447	C-T	HET
SBS	Chr6	761448	T-C	HET
SBS	Chr7	1596455	A-G	Homo	NON_SYNONYMOUS_CODING	LOC_Os07g03820
SBS	Chr8	22057014	G-A	HET
SBS	Chr8	27746761	C-T	Homo
SBS	Chr9	18589062	A-G	Homo
SBS	Chr9	19463953	A-G	Homo
SBS	Chr9	2208603	T-C	Homo
SBS	Chr9	9998961	C-T	HET

Deletions: 17

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr8	664595	664600	5
Deletion	Chr3	2171056	2171072	16	LOC_Os03g04630
Deletion	Chr8	2605615	2605634	19
Deletion	Chr6	5195845	5195853	8	LOC_Os06g10150
Deletion	Chr12	5199842	5199849	7	LOC_Os12g09820
Deletion	Chr2	5279921	5279922	1
Deletion	Chr4	6514205	6514210	5
Deletion	Chr7	7437416	7437427	11
Deletion	Chr3	7553402	7553404	2	LOC_Os03g13920
Deletion	Chr12	8661993	8662002	9
Deletion	Chr6	9408967	9408978	11
Deletion	Chr5	11996173	11996176	3	LOC_Os05g20440
Deletion	Chr3	13293674	13293687	13
Deletion	Chr12	17421268	17421270	2	LOC_Os12g29350
Deletion	Chr5	18619001	18631000	11999	LOC_Os05g31970
Deletion	Chr2	23664972	23664975	3	LOC_Os02g39180
Deletion	Chr1	40125243	40125244	1

Insertions: 3

Variant Type	Chromosome	Start	End	Size (bp)
Insertion	Chr12	11913766	11913767	2
Insertion	Chr5	21816867	21816867	1
Insertion	Chr8	3232481	3232483	3

Inversions: 9

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr4	10332844	10813679	LOC_Os04g18660
Inversion	Chr4	10334159	10813068	LOC_Os04g18660
Inversion	Chr4	10812922	11455771	2
Inversion	Chr4	11360100	11455572	2
Inversion	Chr4	11360112	11455795	LOC_Os04g20310
Inversion	Chr11	20080198	20453718
Inversion	Chr11	20080203	20762131	2
Inversion	Chr11	20404476	20762116	2
Inversion	Chr11	20404479	20453718	LOC_Os11g34824

Translocations: 5

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr12	6659879	Chr5	2040949	2
Translocation	Chr2	11548165	Chr1	22081733	LOC_Os02g19730
Translocation	Chr12	22022332	Chr4	15487733
Translocation	Chr3	35009613	Chr1	39641163	2
Translocation	Chr3	35013906	Chr1	39641158	2

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