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Mutant Information

Variant Information

Single base substitutions: 36

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	14258265	T-G	HET
SBS	Chr1	2951864	C-A	HET	NON_SYNONYMOUS_CODING	LOC_Os01g06200
SBS	Chr1	4755265	C-A	HET	NON_SYNONYMOUS_CODING	LOC_Os01g09340
SBS	Chr10	13203684	G-A	HET
SBS	Chr10	21177601	A-T	Homo
SBS	Chr10	21177603	C-T	Homo
SBS	Chr10	21177609	A-T	Homo
SBS	Chr10	4556631	G-A	HET
SBS	Chr10	5040174	C-A	Homo
SBS	Chr11	15496401	A-G	Homo
SBS	Chr11	3158427	A-G	HET
SBS	Chr11	5599580	A-T	HET
SBS	Chr12	13273438	C-T	HET
SBS	Chr12	14349628	G-A	HET
SBS	Chr12	2172570	G-A	Homo
SBS	Chr2	28334233	G-T	HET
SBS	Chr3	11200936	A-T	HET
SBS	Chr3	22796652	A-G	HET
SBS	Chr3	25287675	A-T	HET
SBS	Chr3	32375430	G-A	Homo
SBS	Chr3	32375431	G-T	Homo
SBS	Chr3	32544544	G-A	Homo
SBS	Chr3	7713094	G-T	HET
SBS	Chr3	9377516	A-C	HET
SBS	Chr4	14224358	C-T	Homo
SBS	Chr4	21101621	C-G	HET
SBS	Chr4	33037971	C-A	Homo	NON_SYNONYMOUS_CODING	LOC_Os04g55530
SBS	Chr5	11988951	G-A	HET	NON_SYNONYMOUS_CODING	LOC_Os05g20430
SBS	Chr5	21293348	A-C	Homo
SBS	Chr6	185095	T-C	Homo
SBS	Chr6	25155001	A-G	HET
SBS	Chr6	25435764	A-G	HET
SBS	Chr6	26975701	C-A	HET
SBS	Chr6	9570582	A-T	HET
SBS	Chr7	20128959	T-A	HET
SBS	Chr7	27636899	T-C	Homo

Deletions: 14

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr9	2261025	2261029	4	LOC_Os09g04260
Deletion	Chr7	4528001	4540000	11999	LOC_Os07g08790
Deletion	Chr11	8289133	8289144	11
Deletion	Chr2	9052389	9052398	9
Deletion	Chr3	9893001	9988000	94999	16
Deletion	Chr8	10230607	10230608	1
Deletion	Chr4	15124585	15124587	2	LOC_Os04g25990
Deletion	Chr6	15138344	15138345	1	LOC_Os06g25890
Deletion	Chr1	18915877	18915879	2
Deletion	Chr4	20584840	20584854	14
Deletion	Chr3	25947001	26341000	393999	59
Deletion	Chr1	31816106	31816108	2	LOC_Os01g55280
Deletion	Chr1	38421260	38421267	7
Deletion	Chr1	40785531	40785535	4

Insertions: 5

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr1	17057524	17057525	2	LOC_Os01g31190
Insertion	Chr3	18407679	18407692	14
Insertion	Chr6	22465517	22465517	1
Insertion	Chr7	24941088	24941088	1
Insertion	Chr8	16899200	16899205	6

Inversions: 1

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr3	25289355	25946017	LOC_Os03g45920

Translocations: 7

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr6	439381	Chr2	29439183	2
Translocation	Chr6	439390	Chr2	29439419	2
Translocation	Chr10	2998743	Chr1	37755062
Translocation	Chr7	7873706	Chr6	30023811	2
Translocation	Chr6	10379484	Chr1	2481678	LOC_Os06g17880
Translocation	Chr12	16335317	Chr8	18384093	2
Translocation	Chr6	23392749	Chr2	20261349

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