Search Results

Mutant Information

Variant Information

Single base substitutions: 26

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	42766057	C-T	HET
SBS	Chr1	42907122	G-A	HET
SBS	Chr2	18935512	G-C	Homo
SBS	Chr3	30360194	A-G	HET
SBS	Chr4	2824948	G-A	HET
SBS	Chr4	6601743	G-A	HET
SBS	Chr4	23944044	C-T	HET
SBS	Chr4	27335682	T-A	HET
SBS	Chr5	8667222	C-T	HET	NON_SYNONYMOUS_CODING	LOC_Os05g15280
SBS	Chr5	27036903	C-A	Homo
SBS	Chr6	14356532	C-T	HET
SBS	Chr6	15489823	G-A	HET
SBS	Chr6	27996549	C-T	Homo
SBS	Chr7	462462	T-A	HET
SBS	Chr7	13196716	C-A	Homo
SBS	Chr7	27208430	G-A	HET
SBS	Chr8	4960220	G-A	HET
SBS	Chr8	8786113	C-T	HET
SBS	Chr9	11656895	C-G	HET
SBS	Chr10	15163769	A-G	HET
SBS	Chr11	12715180	G-A	Homo
SBS	Chr11	26129070	T-A	HET
SBS	Chr12	326506	A-T	Homo
SBS	Chr12	326515	A-G	Homo
SBS	Chr12	4505540	T-C	Homo
SBS	Chr12	14315179	C-T	HET

Deletions: 19

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr12	324082	324084	2
Deletion	Chr1	856312	856320	8
Deletion	Chr3	3124275	3124279	4
Deletion	Chr8	5075884	5075906	22
Deletion	Chr11	5994556	5994561	5
Deletion	Chr1	6824492	6824496	4
Deletion	Chr8	12081048	12081057	9	LOC_Os08g20160
Deletion	Chr3	12959400	12959416	16
Deletion	Chr6	14715432	14715433	1
Deletion	Chr5	15264001	15473000	208999	41
Deletion	Chr5	15481001	15617000	135999	23
Deletion	Chr8	17661295	17661298	3
Deletion	Chr11	18713895	18713897	2	LOC_Os11g31840
Deletion	Chr9	20593320	20593322	2
Deletion	Chr2	20697209	20697211	2
Deletion	Chr11	21351857	21351890	33
Deletion	Chr12	22212635	22212636	1
Deletion	Chr7	24898569	24898570	1
Deletion	Chr3	25967591	25967593	2

Insertions: 5

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr5	25659693	25659694	2
Insertion	Chr2	31327455	31327455	1
Insertion	Chr10	407975	408084	110	LOC_Os10g016
Insertion	Chr10	7673651	7673677	27
Insertion	Chr12	9856110	9856110	1

Inversions: 5

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr8	3818340	3954499
Inversion	Chr8	3818347	3954498
Inversion	Chr9	5534964	5605166
Inversion	Chr9	5534977	5605185
Inversion	Chr5	15262473	15266391	2

Translocations: 4

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr7	959249	Chr5	28724711	2
Translocation	Chr10	6582742	Chr9	7136331	2
Translocation	Chr12	18521479	Chr9	1654382	LOC_Os12g30824
Translocation	Chr6	20565754	Chr3	23167128	LOC_Os03g41700

Main menu