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Mutant Information

Variant Information

Single base substitutions: 56

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	5286007	T-A	HET
SBS	Chr1	6104311	G-T	HET
SBS	Chr1	10532504	T-C	HET
SBS	Chr1	15443981	C-T	HET
SBS	Chr1	17064482	A-T	HET
SBS	Chr1	26474428	G-A	HET
SBS	Chr1	27281072	G-A	HET
SBS	Chr1	29333294	G-A	HET
SBS	Chr1	39160822	G-T	Homo
SBS	Chr2	4054127	G-A	Homo
SBS	Chr2	8464518	G-A	HET
SBS	Chr2	16828699	T-A	HET
SBS	Chr2	17001269	C-T	HET	NON_SYNONYMOUS_CODING	LOC_Os02g28730
SBS	Chr3	17778537	G-A	HET
SBS	Chr3	19251318	A-C	HET
SBS	Chr3	24212446	G-A	Homo
SBS	Chr3	35576413	C-G	HET
SBS	Chr4	3120940	T-G	Homo
SBS	Chr4	3158188	G-A	Homo	NON_SYNONYMOUS_CODING	LOC_Os04g06080
SBS	Chr4	6505943	C-T	HET
SBS	Chr4	23596210	T-C	HET
SBS	Chr4	23917467	C-T	HET
SBS	Chr4	25933266	G-A	HET
SBS	Chr4	28223352	A-G	HET
SBS	Chr4	28893437	T-C	Homo	NON_SYNONYMOUS_CODING	LOC_Os04g48460
SBS	Chr4	29737760	G-C	Homo
SBS	Chr4	31680269	A-T	HET
SBS	Chr4	31680273	A-G	HET
SBS	Chr6	3937446	A-G	HET
SBS	Chr6	15595452	T-A	Homo
SBS	Chr6	15860641	C-T	HET
SBS	Chr6	29040600	G-A	HET
SBS	Chr7	148209	T-C	HET
SBS	Chr7	4543598	T-A	HET
SBS	Chr7	7800486	C-G	HET
SBS	Chr7	11542306	G-A	HET
SBS	Chr7	13724565	A-T	HET
SBS	Chr8	687906	T-C	HET
SBS	Chr8	2398536	T-G	Homo
SBS	Chr8	20444446	G-A	Homo
SBS	Chr9	1706465	C-T	HET
SBS	Chr9	11679057	C-T	HET
SBS	Chr10	824779	G-A	HET
SBS	Chr10	11007907	T-A	Homo	NON_SYNONYMOUS_CODING	LOC_Os10g21490
SBS	Chr10	12201047	T-C	HET
SBS	Chr10	21661501	T-A	HET
SBS	Chr10	21661502	C-T	HET
SBS	Chr10	21661503	A-T	HET
SBS	Chr11	18978244	G-A	HET
SBS	Chr11	21354702	C-T	Homo
SBS	Chr11	21354703	C-T	Homo
SBS	Chr12	8947468	G-A	HET
SBS	Chr12	14726685	T-C	HET
SBS	Chr12	18394749	C-A	HET
SBS	Chr12	19983708	G-A	Homo
SBS	Chr12	23275427	C-G	Homo	NON_SYNONYMOUS_CODING	LOC_Os12g37870

Deletions: 40

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr9	1485983	1485984	1
Deletion	Chr5	2226967	2226969	2
Deletion	Chr7	2455168	2455171	3
Deletion	Chr7	3163956	3163959	3
Deletion	Chr12	3500564	3500575	11
Deletion	Chr5	4961001	4969000	7999	2
Deletion	Chr10	5336646	5336676	30
Deletion	Chr10	7763578	7763579	1
Deletion	Chr3	8082187	8082198	11
Deletion	Chr12	9082131	9082143	12
Deletion	Chr1	9099361	9099365	4	LOC_Os01g16124
Deletion	Chr1	9185076	9185078	2
Deletion	Chr2	9701403	9701404	1	LOC_Os02g16990
Deletion	Chr1	10684922	10684927	5
Deletion	Chr1	10810001	10823000	12999	3
Deletion	Chr4	10922750	10922751	1	LOC_Os04g19610
Deletion	Chr6	11199814	11199817	3
Deletion	Chr5	12145716	12145728	12
Deletion	Chr11	13356439	13356440	1	LOC_Os11g23200
Deletion	Chr9	13720579	13720580	1
Deletion	Chr10	14389750	14389765	15
Deletion	Chr12	15008203	15008218	15
Deletion	Chr3	16325379	16325380	1
Deletion	Chr8	16399824	16399825	1
Deletion	Chr12	16434348	16434358	10	LOC_Os12g27870
Deletion	Chr5	16930125	16930127	2
Deletion	Chr11	19438677	19438678	1
Deletion	Chr2	20549654	20549669	15	LOC_Os02g34350
Deletion	Chr11	20726003	20726006	3
Deletion	Chr7	21210342	21210350	8
Deletion	Chr3	21954834	21954839	5
Deletion	Chr12	22503550	22503562	12
Deletion	Chr1	22678826	22678828	2
Deletion	Chr8	22786861	22786883	22
Deletion	Chr4	24322217	24322222	5
Deletion	Chr12	26388877	26388890	13
Deletion	Chr4	32922231	32922237	6
Deletion	Chr4	33608057	33608059	2
Deletion	Chr3	33608451	33608452	1	LOC_Os03g59040
Deletion	Chr2	34924778	34924780	2

Insertions: 4

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr5	49552	49553	2
Insertion	Chr7	634561	634565	5
Insertion	Chr2	20292057	20292194	138
Insertion	Chr4	9823576	9823576	1	LOC_Os04g17880

Inversions: 8

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr7	1996919	2046844	2
Inversion	Chr7	1997094	2046855	2
Inversion	Chr3	3744571	3744679	LOC_Os03g07370
Inversion	Chr7	21202729	21219936
Inversion	Chr7	21203194	21220139
Inversion	Chr5	23624714	23625131	LOC_Os05g40220
Inversion	Chr4	23635221	23635526	LOC_Os04g39670
Inversion	Chr3	32928111	32928398	LOC_Os03g57780

Translocations: 4

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr5	13678443	Chr2	16818197
Translocation	Chr6	15405516	Chr4	31987837	LOC_Os04g53670
Translocation	Chr11	27077873	Chr7	21220132
Translocation	Chr11	27077880	Chr7	21219937

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