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Mutant Information

Variant Information

Single base substitutions: 24

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	19162895	G-A	HET	NON_SYNONYMOUS_CODING	LOC_Os01g34730
SBS	Chr1	9107878	C-T	Homo
SBS	Chr10	17064628	G-A	HET
SBS	Chr10	20907248	C-A	HET
SBS	Chr11	16723574	C-A	HET
SBS	Chr2	14067225	A-C	Homo	NON_SYNONYMOUS_CODING	LOC_Os02g24250
SBS	Chr2	147038	A-G	HET
SBS	Chr4	25379829	G-A	Homo
SBS	Chr4	5530490	C-A	HET
SBS	Chr4	6418521	A-G	Homo
SBS	Chr5	10467729	C-T	HET
SBS	Chr5	18855966	A-T	HET
SBS	Chr5	29682585	T-A	HET
SBS	Chr6	22657551	C-A	Homo
SBS	Chr6	27544066	C-T	Homo	NON_SYNONYMOUS_CODING	LOC_Os06g45530
SBS	Chr7	16128465	A-G	HET
SBS	Chr7	17766523	A-T	HET
SBS	Chr7	18232678	A-T	HET
SBS	Chr7	22153173	A-T	HET
SBS	Chr7	27859668	G-A	Homo
SBS	Chr8	25473788	T-C	HET
SBS	Chr8	25718786	A-T	HET
SBS	Chr8	3456585	C-G	Homo
SBS	Chr9	16699474	A-G	HET

Deletions: 8

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr3	2350480	2350481	1
Deletion	Chr8	2561001	2873000	311999	43
Deletion	Chr7	4521299	4521301	2
Deletion	Chr10	11955451	11955458	7
Deletion	Chr9	12826681	12826684	3
Deletion	Chr5	14725154	14725155	1
Deletion	Chr12	18910985	18910993	8
Deletion	Chr11	19036640	19036654	14	LOC_Os11g32220

Insertions: 7

Variant Type	Chromosome	Start	End	Size (bp)
Insertion	Chr1	4839595	4839627	33
Insertion	Chr12	1823813	1823830	18
Insertion	Chr2	23351769	23351769	1
Insertion	Chr3	27345028	27345029	2
Insertion	Chr4	7961462	7961464	3
Insertion	Chr7	7179441	7179442	2
Insertion	Chr9	12365202	12365202	1

Inversions: 5

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr8	2521428	2561244
Inversion	Chr8	2873889	3450308
Inversion	Chr11	4532155	5023553	LOC_Os11g08569
Inversion	Chr9	5365775	5527526
Inversion	Chr9	5365823	5565694	LOC_Os09g10220

Translocations: 6

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr11	4532167	Chr2	9939004	LOC_Os11g08569
Translocation	Chr11	5023564	Chr2	9946422
Translocation	Chr11	18526251	Chr6	18877959	2
Translocation	Chr12	26091452	Chr1	17722193
Translocation	Chr11	26139332	Chr9	13620996
Translocation	Chr11	27105527	Chr4	18553484	LOC_Os04g31040

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