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Mutant Information

Variant Information

Single base substitutions: 29

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	16356103	T-C	HET
SBS	Chr1	17332330	C-T	HET
SBS	Chr1	24292437	C-T	Homo
SBS	Chr1	27206905	T-A	HET
SBS	Chr1	36206396	T-A	HET
SBS	Chr2	2531208	T-G	HET
SBS	Chr3	28977007	A-T	HET
SBS	Chr3	30157618	C-T	Homo
SBS	Chr6	7902220	G-A	HET
SBS	Chr6	17182333	A-G	Homo
SBS	Chr6	24573238	C-T	Homo
SBS	Chr6	25316947	T-C	Homo
SBS	Chr6	25316950	G-A	Homo
SBS	Chr7	8563563	A-G	Homo
SBS	Chr8	10075683	T-A	Homo
SBS	Chr8	22076979	T-C	HET	NON_SYNONYMOUS_CODING	LOC_Os08g35040
SBS	Chr8	24826593	A-T	Homo
SBS	Chr8	27596037	C-T	Homo
SBS	Chr9	395704	G-A	HET
SBS	Chr9	1361364	T-C	HET
SBS	Chr9	3997712	C-T	HET	NON_SYNONYMOUS_CODING	LOC_Os09g07860
SBS	Chr10	1540391	T-A	HET
SBS	Chr10	2394817	T-C	Homo
SBS	Chr10	19703698	C-T	HET
SBS	Chr11	7729946	A-T	HET
SBS	Chr11	10280757	T-G	HET
SBS	Chr11	18838613	G-A	Homo
SBS	Chr11	21323131	G-A	HET
SBS	Chr12	21713418	C-T	HET	NON_SYNONYMOUS_CODING	LOC_Os12g35710

Deletions: 17

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr10	3051991	3052002	11
Deletion	Chr9	5374723	5374724	1	LOC_Os09g09880
Deletion	Chr8	8979722	8979725	3
Deletion	Chr7	9503025	9503031	6
Deletion	Chr10	10665238	10665242	4
Deletion	Chr3	13503100	13503105	5
Deletion	Chr6	14529875	14529882	7	LOC_Os06g24730
Deletion	Chr10	20441714	20441715	1
Deletion	Chr8	22269495	22269496	1
Deletion	Chr10	23027555	23027561	6	LOC_Os10g42690
Deletion	Chr2	24944140	24944142	2
Deletion	Chr4	26615001	26991000	375999	61
Deletion	Chr7	26650835	26650844	9	LOC_Os07g44670
Deletion	Chr1	27069865	27069868	3
Deletion	Chr7	27668979	27669000	21
Deletion	Chr4	28947442	28947443	1
Deletion	Chr4	34399027	34399028	1

Insertions: 8

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr3	10047167	10047167	1
Insertion	Chr5	14520416	14520417	2
Insertion	Chr8	13323883	13323884	2
Insertion	Chr1	33083050	33083447	398	LOC_Os01g57250
Insertion	Chr8	3980778	3980778	1
Insertion	Chr10	9807979	9807982	4
Insertion	Chr12	21983458	21983458	1
Insertion	Chr12	25850021	25850021	1	LOC_Os12g41730

Inversions: 5

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr8	9763736	10188066
Inversion	Chr2	17807551	18495154	LOC_Os02g29960
Inversion	Chr3	23709188	24363703
Inversion	Chr3	23709230	24363711
Inversion	Chr7	26565498	26565605

Translocations: 14

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr12	2959787	Chr2	11267491	2
Translocation	Chr9	4453214	Chr8	19754312
Translocation	Chr11	7181865	Chr1	32519257	LOC_Os01g56410
Translocation	Chr9	7357912	Chr3	32500834
Translocation	Chr7	8227764	Chr4	31548685	2
Translocation	Chr8	13024923	Chr5	11074369	LOC_Os05g19080
Translocation	Chr8	13024937	Chr5	9641227
Translocation	Chr9	13620988	Chr4	7872859
Translocation	Chr12	20293572	Chr11	29013121	2
Translocation	Chr12	21263522	Chr7	4114880	LOC_Os12g34930
Translocation	Chr6	21657459	Chr4	17923967	LOC_Os06g36770
Translocation	Chr4	24962093	Chr1	35969182	LOC_Os04g42160
Translocation	Chr11	27573986	Chr5	19106506	LOC_Os11g45540
Translocation	Chr11	28639609	Chr8	5549401

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