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Mutant Information

Variant Information

Single base substitutions: 30

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	10896317	T-C	Homo
SBS	Chr1	36625302	C-T	Homo
SBS	Chr1	43239823	C-A	Homo
SBS	Chr10	2993836	G-A	HET
SBS	Chr11	17414676	G-A	Homo
SBS	Chr12	21070179	A-G	HET
SBS	Chr12	26751974	G-A	Homo
SBS	Chr12	4337467	T-C	Homo
SBS	Chr2	35073305	C-A	Homo
SBS	Chr3	19836713	C-T	HET
SBS	Chr3	36204771	A-G	Homo	NON_SYNONYMOUS_CODING	LOC_Os03g64070
SBS	Chr3	9016854	G-A	HET
SBS	Chr4	14329374	T-C	HET
SBS	Chr4	23582279	G-A	HET
SBS	Chr4	35113097	T-A	HET
SBS	Chr4	7379172	T-A	HET
SBS	Chr5	17541222	T-G	HET	NON_SYNONYMOUS_CODING	LOC_Os05g30270
SBS	Chr5	2291763	G-A	HET
SBS	Chr6	15598901	G-A	Homo
SBS	Chr8	10982530	A-G	Homo
SBS	Chr8	11790132	A-G	Homo
SBS	Chr8	19817422	T-C	Homo
SBS	Chr8	22748765	A-C	HET
SBS	Chr8	25750590	G-C	Homo
SBS	Chr8	25750591	C-T	Homo
SBS	Chr9	11247835	G-A	Homo
SBS	Chr9	14633705	C-T	Homo
SBS	Chr9	19519747	G-A	Homo	NON_SYNONYMOUS_CODING	LOC_Os09g32730
SBS	Chr9	19519748	A-T	Homo	NON_SYNONYMOUS_CODING	LOC_Os09g32730
SBS	Chr9	22079922	G-C	HET

Deletions: 22

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr5	194174	194182	8
Deletion	Chr12	2668803	2668813	10
Deletion	Chr6	3136749	3136759	10	LOC_Os06g06680
Deletion	Chr8	4304534	4304541	7	LOC_Os08g07700
Deletion	Chr1	6385001	6398000	12999	3
Deletion	Chr1	9107656	9107665	9
Deletion	Chr8	11012496	11012505	9
Deletion	Chr8	11209419	11210414	995	LOC_Os08g18780
Deletion	Chr7	11986830	11986833	3	LOC_Os07g20720
Deletion	Chr1	12695197	12695202	5
Deletion	Chr12	12748236	12748262	26	LOC_Os12g22590
Deletion	Chr5	14070494	14070496	2
Deletion	Chr12	19730001	20159000	428999	62
Deletion	Chr12	20169001	20330000	160999	31
Deletion	Chr8	20213696	20213704	8
Deletion	Chr12	26182182	26182192	10
Deletion	Chr2	26509382	26509396	14
Deletion	Chr8	26743122	26743129	7
Deletion	Chr5	27633651	27633652	1
Deletion	Chr6	27857303	27857304	1
Deletion	Chr1	33181602	33181603	1
Deletion	Chr1	33908789	33908801	12

Insertions: 3

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr6	12165190	12165190	1
Insertion	Chr6	14147695	14147695	1	LOC_Os06g24170
Insertion	Chr8	16898110	16898357	248

Inversions: 4

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr9	1979935	2319792	2
Inversion	Chr9	1979938	2319800	2
Inversion	Chr1	7775549	7876037
Inversion	Chr12	19478858	19736475	LOC_Os12g32690

Translocations: 4

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr11	581708	Chr9	19096993
Translocation	Chr6	10540140	Chr5	11349505	2
Translocation	Chr6	21576303	Chr1	15444226	LOC_Os06g36690
Translocation	Chr11	28201140	Chr9	8845342	2

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