Search Results

Mutant Information

Variant Information

Single base substitutions: 32

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr2	2529916	T-C	HET
SBS	Chr2	5895184	G-A	HET
SBS	Chr2	7195801	G-A	HET	NON_SYNONYMOUS_CODING	LOC_Os02g13470
SBS	Chr2	12172578	C-T	HET	NON_SYNONYMOUS_CODING	LOC_Os02g20660
SBS	Chr2	26840803	T-G	HET
SBS	Chr3	935395	C-A	HET
SBS	Chr3	26369821	T-C	Homo
SBS	Chr3	30649952	C-T	HET
SBS	Chr4	678007	G-A	HET
SBS	Chr4	1331713	C-T	HET	NON_SYNONYMOUS_CODING	LOC_Os04g03180
SBS	Chr4	1835981	G-A	HET
SBS	Chr4	2920828	A-G	HET
SBS	Chr4	3116779	C-T	HET	STOP_GAINED	LOC_Os04g06010
SBS	Chr4	9658943	T-A	HET
SBS	Chr4	13865206	G-A	HET
SBS	Chr4	26353955	T-C	Homo
SBS	Chr5	14844948	T-C	Homo
SBS	Chr6	5171564	A-G	Homo
SBS	Chr6	6968587	G-A	Homo
SBS	Chr6	8563189	G-A	Homo
SBS	Chr6	24085720	C-A	Homo
SBS	Chr7	248190	C-T	HET
SBS	Chr7	21415696	C-T	HET
SBS	Chr8	23667308	A-T	Homo
SBS	Chr9	1629209	C-T	HET
SBS	Chr10	12654956	A-G	Homo
SBS	Chr11	9825839	A-T	HET
SBS	Chr11	16732253	A-T	HET	NON_SYNONYMOUS_CODING	LOC_Os11g28910
SBS	Chr12	11468824	T-G	Homo
SBS	Chr12	13531304	C-T	HET	NON_SYNONYMOUS_CODING	LOC_Os12g23800
SBS	Chr12	13531309	A-G	HET	NON_SYNONYMOUS_CODING	LOC_Os12g23800
SBS	Chr12	22098483	G-T	HET

Deletions: 18

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr8	7148501	7148502	1	LOC_Os08g12130
Deletion	Chr1	9958174	9958175	1
Deletion	Chr10	9964359	9964382	23
Deletion	Chr9	11993640	11993641	1
Deletion	Chr7	12166680	12166681	1
Deletion	Chr5	13749232	13749233	1
Deletion	Chr3	15185001	15196000	10999	LOC_Os03g26590
Deletion	Chr8	16270377	16270380	3
Deletion	Chr4	21574175	21574176	1
Deletion	Chr1	21748376	21748381	5
Deletion	Chr7	23525311	23525314	3
Deletion	Chr8	23595946	23595956	10
Deletion	Chr6	24245629	24245630	1
Deletion	Chr1	25452431	25452446	15
Deletion	Chr6	26303871	26303873	2
Deletion	Chr1	28891683	28891686	3	LOC_Os01g50330
Deletion	Chr1	35774528	35774529	1
Deletion	Chr1	41677799	41677802	3

Insertions: 5

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr1	24450635	24450636	2
Insertion	Chr2	35261865	35261866	2
Insertion	Chr12	3017790	3017791	2
Insertion	Chr6	1276190	1276197	8	LOC_Os06g03340
Insertion	Chr1	16763248	16763250	3	LOC_Os01g29900

Inversions: 3

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr3	155847	901579	LOC_Os03g01240
Inversion	Chr3	155852	901587	LOC_Os03g01240
Inversion	Chr5	5134528	5212044	2

Translocations: 5

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr6	9794993	Chr4	17545681	LOC_Os04g29530
Translocation	Chr10	18188530	Chr9	1568692	2
Translocation	Chr8	19479840	Chr4	35498773
Translocation	Chr8	22301720	Chr6	13618918
Translocation	Chr11	22546108	Chr2	19802223

Main menu