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Mutant Information

Variant Information

Single base substitutions: 27

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	12787317	C-T	HET	STOP_GAINED	LOC_Os01g22750
SBS	Chr1	12993361	C-T	HET	NON_SYNONYMOUS_CODING	LOC_Os01g23090
SBS	Chr1	14967850	G-A	HET
SBS	Chr1	19167156	G-A	HET	NON_SYNONYMOUS_CODING	LOC_Os01g34750
SBS	Chr1	19167157	T-A	HET
SBS	Chr10	12546326	C-A	HET
SBS	Chr10	15824395	T-A	HET
SBS	Chr11	19084537	T-C	HET
SBS	Chr11	2136226	T-A	HET
SBS	Chr11	3095103	G-T	HET
SBS	Chr12	1156364	G-A	HET
SBS	Chr12	24329851	G-C	HET
SBS	Chr12	9025228	C-A	HET	NON_SYNONYMOUS_CODING	LOC_Os12g15820
SBS	Chr2	31434521	T-A	HET	NON_SYNONYMOUS_CODING	LOC_Os02g51330
SBS	Chr2	9208446	G-T	Homo
SBS	Chr3	17202056	G-C	Homo
SBS	Chr3	6986336	C-T	HET
SBS	Chr4	12783042	C-T	HET
SBS	Chr4	19664023	A-G	HET
SBS	Chr4	30591531	G-T	HET
SBS	Chr4	7710075	T-A	HET	NON_SYNONYMOUS_CODING	LOC_Os04g13820
SBS	Chr7	19951968	C-A	HET
SBS	Chr7	25562	G-A	HET
SBS	Chr7	7603139	G-A	HET
SBS	Chr7	9656753	G-A	HET
SBS	Chr8	10787651	T-A	HET
SBS	Chr8	94764	C-T	HET

Deletions: 16

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr3	1080286	1080288	2
Deletion	Chr3	6762215	6762217	2
Deletion	Chr10	7209709	7209769	60	LOC_Os10g13350
Deletion	Chr6	10018698	10018706	8
Deletion	Chr7	12175990	12175991	1
Deletion	Chr8	12472642	12472645	3	LOC_Os08g20770
Deletion	Chr4	14111089	14111090	1
Deletion	Chr10	15766386	15766391	5
Deletion	Chr5	16274586	16274590	4
Deletion	Chr11	20084001	20105000	20999	3
Deletion	Chr4	24624991	24625003	12
Deletion	Chr11	25055441	25056039	598
Deletion	Chr11	25677047	25677052	5	LOC_Os11g42640
Deletion	Chr4	26414689	26414691	2
Deletion	Chr7	26761922	26761937	15
Deletion	Chr3	31623063	31623090	27	LOC_Os03g55570

Insertions: 11

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr1	40308970	40308970	1	LOC_Os01g69810
Insertion	Chr10	2580103	2580103	1
Insertion	Chr12	25114842	25114843	2
Insertion	Chr3	11315495	11315495	1	LOC_Os03g20080
Insertion	Chr4	8699631	8699633	3	LOC_Os04g16030
Insertion	Chr5	15683386	15683395	10
Insertion	Chr6	8811236	8811365	130	LOC_Os06g15540
Insertion	Chr8	12237941	12237952	12	LOC_Os08g20370
Insertion	Chr8	17910649	17910796	148
Insertion	Chr8	321645	321648	4
Insertion	Chr8	7532153	7532153	1

Inversions: 3

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr4	13192603	13517064
Inversion	Chr4	13192608	13517064
Inversion	Chr11	20103463	20308039	2

Translocations: 1

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr9	6747954	Chr6	17781366

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