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Mutant Information

Variant Information

Single base substitutions: 48

Variant Type	Chromosome	Position	Change	Genotype	Gene Affected
SBS	Chr1	16578160	C-T	HET	LOC_Os01g29580
SBS	Chr1	20651357	A-T	HET
SBS	Chr1	26044888	C-T	HET	LOC_Os01g45860
SBS	Chr10	12948419	A-T	HOMO
SBS	Chr11	13115791	C-G	HET
SBS	Chr11	13862668	T-A	HET
SBS	Chr11	15294931	C-T	HET
SBS	Chr11	16028906	G-A	HET
SBS	Chr11	20201467	G-A	HET
SBS	Chr11	20900871	C-T	HET	LOC_Os11g35650
SBS	Chr11	21267725	C-T	HET
SBS	Chr11	28349967	G-A	HET
SBS	Chr11	516610	G-T	HET
SBS	Chr11	516611	C-T	HET
SBS	Chr11	516612	G-T	HET
SBS	Chr11	988107	C-T	HET
SBS	Chr12	14402641	C-A	HET	LOC_Os12g25070
SBS	Chr12	16837224	C-A	HET
SBS	Chr12	21438615	G-A	HET	LOC_Os12g35280
SBS	Chr12	7853097	A-G	HET
SBS	Chr2	31992514	T-A	HOMO
SBS	Chr2	34254887	C-T	HET
SBS	Chr3	1061090	T-A	HET
SBS	Chr3	10747950	G-A	HET
SBS	Chr3	12399158	T-A	HOMO
SBS	Chr3	2493091	T-G	HET
SBS	Chr3	33154424	C-A	HET
SBS	Chr4	12022318	C-T	HET
SBS	Chr4	32024781	T-C	HOMO
SBS	Chr4	5769879	A-G	HET
SBS	Chr5	19318655	G-T	HET
SBS	Chr5	19318656	G-T	HET
SBS	Chr5	6439560	G-A	HET
SBS	Chr6	13889971	T-C	HOMO
SBS	Chr6	3092895	T-G	HET
SBS	Chr7	18008974	G-T	HET
SBS	Chr7	27494258	A-G	HET
SBS	Chr7	5501415	C-T	HOMO
SBS	Chr7	8133094	T-C	HOMO
SBS	Chr8	10334680	A-G	HET
SBS	Chr8	3571655	A-G	HOMO
SBS	Chr9	11716418	T-C	HET
SBS	Chr9	13336715	G-A	HET	LOC_Os09g22020
SBS	Chr9	1821177	A-G	HOMO
SBS	Chr9	18223848	C-A	HOMO
SBS	Chr9	3745189	C-T	HOMO
SBS	Chr9	4815938	C-A	HET
SBS	Chr9	8308264	A-T	HET

Deletions: 37

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr10	2038538	2038538	1
Deletion	Chr10	3349462	3349730	269	LOC_Os10g06520
Deletion	Chr5	5413959	5413959	1
Deletion	Chr7	5623845	5623845	1
Deletion	Chr6	6702241	6702253	13
Deletion	Chr7	7079032	7079032	1	LOC_Os07g12410
Deletion	Chr7	7610786	7610788	3
Deletion	Chr2	8422761	8422767	7
Deletion	Chr4	8926402	8926406	5	LOC_Os04g16420
Deletion	Chr2	9812718	9812718	1
Deletion	Chr3	10074159	10074169	11
Deletion	Chr10	11107372	11107374	3
Deletion	Chr12	11141520	11141603	84
Deletion	Chr10	12325001	12534000	209000	38
Deletion	Chr10	12560991	12560994	4
Deletion	Chr6	13465604	13465604	1
Deletion	Chr6	14743939	14743940	2
Deletion	Chr4	17335635	17335727	93
Deletion	Chr4	17527131	17527174	44
Deletion	Chr8	18080317	18080322	6
Deletion	Chr10	18591378	18591379	2
Deletion	Chr4	18699659	18699660	2
Deletion	Chr3	19030045	19030046	2
Deletion	Chr5	20397125	20397216	92	LOC_Os05g34420
Deletion	Chr7	20899762	20899765	4
Deletion	Chr10	22184576	22184576	1
Deletion	Chr6	22730348	22730438	91
Deletion	Chr2	22766655	22766696	42
Deletion	Chr12	22891456	22891456	1
Deletion	Chr5	23457499	23457511	13	LOC_Os05g39920
Deletion	Chr11	24671133	24671133	1	LOC_Os11g41170
Deletion	Chr5	25368749	25368749	1	LOC_Os05g43630
Deletion	Chr12	26529184	26529187	4
Deletion	Chr7	28191176	28191182	7
Deletion	Chr6	29273253	29273253	1
Deletion	Chr6	29849962	29849971	10
Deletion	Chr5	29942014	29942015	2

Insertions: 19

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr1	37213454	37213454	1	LOC_Os01g64070
Insertion	Chr10	22612322	22612322	1
Insertion	Chr10	22719832	22719847	16
Insertion	Chr10	4627326	4627329	4
Insertion	Chr11	16926333	16926408	76
Insertion	Chr2	19910409	19910409	1
Insertion	Chr2	24759160	24759160	1
Insertion	Chr4	18682702	18682706	5
Insertion	Chr4	33664240	33664240	1
Insertion	Chr4	5284154	5284154	1	LOC_Os04g09840
Insertion	Chr6	20871572	20871654	83
Insertion	Chr6	23276720	23276720	1
Insertion	Chr6	8507675	8507677	3
Insertion	Chr7	11803365	11803365	1
Insertion	Chr7	16828819	16828819	1	LOC_Os07g28750
Insertion	Chr7	8766718	8766718	1	LOC_Os07g15210
Insertion	Chr8	12104566	12104585	20
Insertion	Chr8	27255845	27255845	1	LOC_Os08g43110
Insertion	Chr8	328363	328363	1

Inversions: 6

Variant Type	Chromosome	Position 1	Position 2
Inversion	Chr3	8226008	8355495
Inversion	Chr3	8226014	8355504
Inversion	Chr3	20299878	20300110
Inversion	Chr7	22949012	23563232
Inversion	Chr7	22949021	23563231
Inversion	Chr8	23396359	23396490

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