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Mutant Information

Variant Information

Single base substitutions: 31

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	17697160	A-G	HET	UTR_5_PRIME
SBS	Chr1	21920463	A-T	HOMO	INTRON
SBS	Chr1	21920464	G-T	HOMO	INTRON
SBS	Chr1	22692909	G-A	HET	INTERGENIC
SBS	Chr1	35366162	T-A	HOMO	SPLICE_SITE_REGION
SBS	Chr1	7195196	C-T	HET	INTERGENIC
SBS	Chr10	2214171	T-A	HOMO	INTERGENIC
SBS	Chr11	18741258	C-A	HOMO	UTR_3_PRIME
SBS	Chr11	18741259	T-A	HOMO	UTR_3_PRIME
SBS	Chr11	18741260	C-A	HOMO	UTR_3_PRIME
SBS	Chr12	10258420	C-T	HOMO	INTRON
SBS	Chr12	16423269	C-T	HET	INTRON
SBS	Chr12	4128713	G-A	HOMO	SYNONYMOUS_CODING
SBS	Chr12	9481296	A-T	HOMO	INTERGENIC
SBS	Chr2	18305894	G-A	HET	INTRON
SBS	Chr2	21615690	T-G	HOMO	INTERGENIC
SBS	Chr2	2363295	A-G	HET	INTERGENIC
SBS	Chr3	29014304	A-C	HOMO	INTERGENIC
SBS	Chr3	35429939	C-A	HET	NON_SYNONYMOUS_CODING	LOC_Os03g62590
SBS	Chr3	5148691	T-A	HET	INTERGENIC
SBS	Chr4	21143987	C-G	HET	INTERGENIC
SBS	Chr5	1522741	C-T	HET	UTR_5_PRIME
SBS	Chr5	22012289	G-C	HET	INTERGENIC
SBS	Chr6	11059913	T-A	HOMO	NON_SYNONYMOUS_CODING	LOC_Os06g19410
SBS	Chr7	15976466	C-T	HOMO	NON_SYNONYMOUS_CODING	LOC_Os07g27420
SBS	Chr7	21258052	A-G	HET	INTERGENIC
SBS	Chr7	4294052	A-G	HOMO	INTERGENIC
SBS	Chr8	15776478	C-G	HET	INTERGENIC
SBS	Chr8	18356165	C-T	HOMO	NON_SYNONYMOUS_CODING	LOC_Os08g29854
SBS	Chr8	8677856	C-A	HET	INTERGENIC
SBS	Chr9	7845392	G-A	HET	INTERGENIC

Deletions: 14

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr8	1462721	1462739	18
Deletion	Chr8	2383557	2383560	3
Deletion	Chr7	2654871	2654878	7
Deletion	Chr6	3253742	3253743	1
Deletion	Chr8	9129151	9129152	1
Deletion	Chr7	13142834	13142843	9
Deletion	Chr7	13143299	13143303	4	LOC_Os07g23320
Deletion	Chr11	16706602	16706616	14
Deletion	Chr11	16708685	16708687	2
Deletion	Chr2	17647050	17647080	30
Deletion	Chr1	19672210	19672212	2
Deletion	Chr5	25453919	25453938	19
Deletion	Chr3	34991729	34991730	1
Deletion	Chr3	36148182	36148184	2

Insertions: 1

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr2	7763376	7763377	2

Inversions: 1

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr6	19754515	20437542

Translocations: 3

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr10	8759690	Chr7	14018404	2
Translocation	Chr12	9480107	Chr5	4162888	LOC_Os05g07730
Translocation	Chr7	24526284	Chr3	1144728	LOC_Os07g40986

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